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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs7169375 chr15:41311046 A/G 0.000213 490 15.17 16.18 17 KM Plot
THCA rs7170049 chr15:41484287 C/A 6.93E-5 468 15.23 15.93 17.33 KM Plot
THCA rs71714742 chr6:24424676 T/TGCCCC 5.55E-15 488 16.37 14.85 11.07 KM Plot
THCA rs71724070 chr1:22395663 CTTTT/C 6.84E-5 476 12.7 18.15 14.9 KM Plot
THCA rs7172599 chr15:89045769 C/G 0.000134 481 16.37 15 15.9 KM Plot
THCA rs7173086 chr15:41509288 A/T 0.000126 490 15.3 15.93 17 KM Plot
THCA rs71754617 chr16:12003805 CT/C 6.78E-13 486 15.68 18.3 9 KM Plot
THCA rs71771373 chr6:153295107 CAA/C 0 487 15.17 18.3 6.92 KM Plot
THCA rs7179681 chr15:41349962 A/T 0.000277 489 14.57 16.8 16.62 KM Plot
THCA rs7181816 chr15:41358720 T/A 0.000139 490 15.17 16.33 16.67 KM Plot
THCA rs7187726 chr16:21049508 T/G 8.85E-7 481 16.23 14.8 27.1 KM Plot
THCA rs7191673 chr16:72308631 T/A 2.85E-11 480 15.93 15.3 14.63 KM Plot
THCA rs7195887 chr16:20862577 T/G 9.15E-5 490 16.37 14.67 17.65 KM Plot
THCA rs7196128 chr16:20800916 A/G 9.15E-5 490 16.37 14.67 17.65 KM Plot
THCA rs721069 chr14:59687305 A/G 0 489 15.9 16.68 3.53 KM Plot